Phospho-Flow Protocol: PFA/MeOH Technique

Materials

  1. Cells of interest.
  2. Chemicals or cytokines for induction of phosphorylation.
  3. Formaldehyde.
    • Ampules of 16% or 32% in water (Electron Microscopy Services).
  4. 100% methanol at 4°C.
  5. Antibodies – various suppliers.
    • Becton Dickinson is currently developing and selling phospho-specific antibodies that are conjugated to Alexa Fluor dyes. These dyes match well to FITC and APC channels, and allow two-color experiments to be performed.
  6. Staining media.
    • PBS (phosphate buffered saline)
    • 0.5% BSA (albumin from bovine serum)
    • 0.02% NaN 3 (sodium azide)
  7. 5 ml FACS tubes.

Experimental Protocol

  1. Stimulate cells. Be sure to keep an unstimulated sample as control.
    • At least 1 million cells provide optimal results, though each sample can go as high as 10 million cells
  2. Fix cells directly with 1.5% formaldehyde for 10 min at room temperature (RT).
  3. Pellet cells at 500g for 5 min.
  4. Resuspend with vortexing in 100% methanol (about 1ml per 1 million cells).
  5. Incubate for 10 min to 16 hours at 4°C (or longer at –20°C).
  6. Pellet (as in Step 3) and wash twice with staining media.
  7. Resuspend cells in staining media at 10 7cells/100 ul.
  8. Add antibodies at optimal titration.
  9. Incubate for 30 min at RT.
  10. Wash with staining media (at least 15 volumes: ~2-3 ml for 100 ul).
  11. Analyze by flow cytometry.

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