Analysis Software

Significance analysis of microarrays (SAM). SAM identifies array features with statistically significant differences in reactivity between sample groups. (Tusher et al, PNAS, 98:5116-21, 2001)

Prediction analysis for microarrays (PAM). PAM performs sample classification from antibody reactivity data to provide a list of significant genes whose expression characterizes each sample group. (Tibshirani et al, PNAS, 99:6567-72, 2002)

Laboratory for statistical analysis of microarrays.

Peak Probability Contrasts (PPC). Class Prediction Software for Protein Mass Spectometry Data